Squid proxy logging and filtering

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http://serverfault.com – I am trying to reduce internet bandwidth consumption. I have installed squid as a transparent proxy server and it is currently getting all traffic from port 80. I am using the proxy_stats.gawk utility to generate reports. I am still only logging 1/4 of the traffic the ISP actually reports. Can i get all traffic on all other ports to go though the proxy as well. i.e. VOIP... How can i Achieve this? (HowTos)