Some problems when Ubuntu boots

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http://askubuntu.com – I installed Ubuntu x64 using wubi which was in the .iso file. Then I found out how to make it bootable and first I had an issue with root.disk file. It told me to remove it and I did. Then I ran Ubuntu and I got a small window (in Ubuntu) and it told me to run dskchk /r from windows. I did that and Ubuntu booted again and I got the same message. What should I do? (HowTos)