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shell scripting testing

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linux-howto

http://www.linuxquestions.org – I have an input file (10000 lines) named ‘out’ in the given format. Each two lines represent one structure. I am giving this data file as input to a shell program which creates 5000 folders; one directory for each chromosomes using built-in tool ‘mfold SEQ=input’ command. The shell program is ‘process.awk’ given below. I am executing with a command ‘awk –f process.awk out’. The program executed and created 1020 directories and after that it is giving error like this: awk: process.awk:6: (FILENAME=out FNR=1022) fatal: can't redirect to `dir1021/input' (No such file or directory) I am (HowTos)