No notifications from apps

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http://forums.androidcentral.com – Hello. I've had this problem for a while now. Apps like ESPN sportcenter and Whatts app will show notifications, but apps like instagram, bleacher report or ebay won't. I've checked the settings in each app millions of times and they're set to show notifications. I'm running the stock rom, phone's rooted and using nova launcher. Any ideas? (HowTos)