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How to properly kill MySQL?

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linux-howto

http://serverfault.com – I have CentOS 64bit with CPanel installed and I use service mysql stop However, it keeps doing ..... for minutes and it never stops. It used to be instant. Any idea why it does that and how to fix? Right now I have to do killall -9 mysql but is there a better way? The server is also very very active. (HowTos)