Get list of Linux files recursively and direct output to file

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http://unix.stackexchange.com – I'm configuring software on Ubuntu for i2b2, and trying to find all of the relevant files on a CentOS image that I downloaded (path below) and am now running on Windows VMWare Player (free for download). I'd like to create a file of the Linux file hierarchy recursively, for both CentOS and Ubuntu, so I can find the relevant files for each program (ie: JBoss, Java, Apache, Axis, Spring Web Framework, Oracle, etc..) and compare configuration. I know how to do a similar thing in Windows by getting the output of all files. Long story short, I just want a dump of all files in the Linux file sy (HowTos)