Apache Server Management

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http://serverfault.com – I have an apache server installed on Windows 7 .. I use it mainly for testing .. Now, I need to modify the settings of the apache to work as real servers. Below is the list I need to approach. First: I have multiple Dynamic DNSes registered at dyndns.com .. I want each one to go to a specific folder .. I have managed to make ports go to different folder, but don't know how to make it with the dynamic DNS or Domain Names .. Second thing, I usually use shell scripts to test security of the server, whenever I use the shell script, I can navigate to every directory on the server, even I can see (HowTos)